Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917034.1_cds_XP_016466677.1_59508
CDS Infomation

[gene=LOC107789397] [db_xref=GeneID:107789397] [protein=probably inactive leucine-rich repeat receptor-like protein kinase At3g28040] [protein_id=XP_016466677.1] [location=complement(join(16140..17625,18012..19564))] [gbkey=CDS]
Sequence

ATGAAAATGTGGTTTTTTTCTTGTCCTTCTTGTTTTCTTATCTTCATATTTCATGTTGGT
TTATTGTATGGATCTTTAGCTGGTGAAACTTTACAACTTAATGATGATGTTTTAGGCCTC
ATTGTATTCAAATCAACTCTTCTTGATCCTAACTCAAAACTCTTATCTTGGAATGAAGAT
GATAACTCTCCTTGTGCATGGGAATTCATCAAATGCAATCCAATGAATGGTAGAGTTTCT
GAACTTAACTTAAATGGTTTAAGTTTATCAGGAAAGATCGGTAGGGGGCTCGAGAAGTTG
CAGTCACTACAGGTATTATCTTTATCAAACAACAACTTCACTGGTCCTATTAGCCCTGAG
TTAGCTTTGTTAACAAATCTTGAAAATCTTAACCTTAGTCAAAATGGACTTTCAGGAAAT
ATTCCTCCATCTATTTCAAAAATAACCTCCTTACAATTTCTTGATCTCTCTCAAAATTCG
TTATCTGGACCTGTCTCTGATACCATGTTTGATAACTGTGGTAATTCGCTACGTTATCTT
TCTTTATCTGGAAATTTTCTTGAAGGTGCATTTCCTACCACAGTTTCCAAATGTAACAAT
TTGAATCATCTCAATGTTTCAAGAAACCATTTATCTGGCGACCCGGGATTTTCGGGGGGA
CTCTGGGGATTGACAAGGCTAAGAACATTAGATCTTTCACATAATGAACTCTCTGAATTA
GTACCTGTTGGTATTTCAGTATTACATCAGTTGAAAGAGTTGTTGTTACAAGGAAATCAA
TTTAGTGGAAAGTTACCTTCTGATATTGGATATTGTCCACACTTGAATAAATTAGATTTG
AGTGAAAATCTATTCACAGGAGCAATCCCAGAGTCAGTACAAAAGCTCAATGCTCTTTCT
TTTCTAAGTTTATCAAACAATATGATAAATGGAGATTTCCCTCAATGGATAAGTAACATG
AGCAGCTTGGAATACTTAGATTTTTCGGGCAATAGTATAGAAGGGACATTGCCTGATTCA
ATAGGGGACTTGAAAATGTTGAAATACTTGAGTTTATCTGGTAATAAGTTAAGTGGAAAG
ATTCCAAAATCCATGGTTTATTGTACTAGTTTATCGACGATTCGGCTAAAAGAAAATGCA
TTGACTGGTAGCATTCCTGAGGGACTGTTTGGTATAGGATTAGAAGAAGCAGATTTTTCA
AGAAATGAGTTAAGTGGTTCAATCCCTCCTGGTTCTGGCAAATTCTTTGAATCACTTCAA
GTTCTTGATTTATCAGGAAACAATCTTACTGGAAATATTCCAGCTGAAGTTGGACTTTTT
TCAAAGTTGAGATATTTGAATCTTTCTTGGAATAATTTTCAATCAAGATTGCCTCCTGAA
GTTGGATATTTTCAGAATCTAACGGTGTTAGATCTTCGATACAGTGCTTTAGTTGGATCA
ATTCCTGGTGATATATGTGATTCTGGTAGCTTAGGAATTCTTCAGCTTGATGGAAATTCA
TTTACTGGACCTATTCCTGATGAGATTGGAAATTGTTCATCCCTTTACTTATTGAGTTTG
TCTCATAATAACTTAAGTGGCTCAATACCAAGGTCTCTTTCAATGTTGAGGAAGCTCAAG
ATTTTGAAGCTAGAGTATAACCAATTGAGTGGAGAAATACCACAAGATCTTGGCAAATTG
GAAAATCTTCTGGCTGTTAATATATCCTACAACAGGCTCGTTGGACGGCTTCCATTAGGT
AATATATTCCAGAATCTAGACCAGAGTTCATTGGAAGGGAATTTGGGCATTTGTTCACCT
TTGTTGAAAGGTCCTTGTAAGATGAATGTGCCAAAGCCTTTGGTTCTTGATCCTTATGCT
TATGGAAACCAAATGGGAGGTCAAAACCGGGGCGATGAAACTTCAAGAAGCAATAGCAAA
AGGTTTAAACACCATAGATTCCTTAGTATTTCATCCATTGTTGCAATCTCTGCTGCAGCT
GTGATCGCGATTGGAGTAATGGTGATAGCCTTACTAAATGCTTCTGTTCGAAGGAAGATT
GCGTTTGTTGACAACGCCTTGGAAAGTATGTGCTCAAGTTCTTCTAAATCCGGGAGCCTA
GCCACAGGAAAGCTAGTGTTGTTGGACTCTAAATCATCCCCGGATTGGACTAATACCAGT
CTTGAATCAGTCCTAAACAAGGCATGTGAAATCGGTGAAGGTGTTTTCGGGACAGTTTAC
AAGGCTCCATTGGGAGGGGAAGGAAGATTAGTAGCTATCAAGAAGCTTGTGACATCAAAG
ATACTCCAATATCCTGAGGACTTCGATAGAGAAGTCCGAGTTTTAGCAAAAGCAAGGCAT
CAAAATCTGATATCCTTAAGAGGGTATTACTGGACTCCTCAACTTCAGCTTTTAGTATCA
GATTATGCACCAGAAGGAAGTTTACAAGCCAAACTACACGAAAGGCCATCGTCTTCACCT
CCACTGTCTTGGTCCACTCGATTCAAGATTGTGCTCGGGACAGCCAAGGGACTAGCACAT
TTGCACCACGCGTTTAGGCCAGCAATCATTCACTACAACATAAAGCCTAGCAACATCCTC
CTTGACGAGAATCTCAACCCGAAAATATCAGATTTCGGGCTAGCAAGGCTCGTGACAAAG
CTCGATAAACACATGATAAGCAACAGGTTCCAGTCTGCACTAGGCTATGTAGCACCTGAA
TTGGCATGCCAGAGCTTAAGGGTGAACGAAAAGTGCGACGTTTATGGTTTTGGGATGTTG
ATTCTTGAAATTGTGACAGGGAGGAGACCAATTGAGTATTGTGAAGACAATGTGTTGATA
CTCAATGATCATGTTAGAGTGTTGCTTGAACAAGGGAATGTGTTAGATTGTGTTGATCCA
ACATTGGATACATATCCTGAAGAGGAAGTTTTGCCTGTTCTGAAATTGGCTTTGGTATGC
ACTTCTCAAATACCATCAAGTAGGCCTTCAATGGCTGAAGTGGTTCAAATCTTGCAGGTC
ATCAAAACACCTGTTCCTCAAAGAATGGAAGCATACTAA

Peptide Sequence

PEP ID

XP_016466677.1
PEP Infomation

PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Nicotiana tabacum]
Sequence

MKMWFFSCPSCFLIFIFHVGLLYGSLAGETLQLNDDVLGLIVFKSTLLDPNSKLLSWNED
DNSPCAWEFIKCNPMNGRVSELNLNGLSLSGKIGRGLEKLQSLQVLSLSNNNFTGPISPE
LALLTNLENLNLSQNGLSGNIPPSISKITSLQFLDLSQNSLSGPVSDTMFDNCGNSLRYL
SLSGNFLEGAFPTTVSKCNNLNHLNVSRNHLSGDPGFSGGLWGLTRLRTLDLSHNELSEL
VPVGISVLHQLKELLLQGNQFSGKLPSDIGYCPHLNKLDLSENLFTGAIPESVQKLNALS
FLSLSNNMINGDFPQWISNMSSLEYLDFSGNSIEGTLPDSIGDLKMLKYLSLSGNKLSGK
IPKSMVYCTSLSTIRLKENALTGSIPEGLFGIGLEEADFSRNELSGSIPPGSGKFFESLQ
VLDLSGNNLTGNIPAEVGLFSKLRYLNLSWNNFQSRLPPEVGYFQNLTVLDLRYSALVGS
IPGDICDSGSLGILQLDGNSFTGPIPDEIGNCSSLYLLSLSHNNLSGSIPRSLSMLRKLK
ILKLEYNQLSGEIPQDLGKLENLLAVNISYNRLVGRLPLGNIFQNLDQSSLEGNLGICSP
LLKGPCKMNVPKPLVLDPYAYGNQMGGQNRGDETSRSNSKRFKHHRFLSISSIVAISAAA
VIAIGVMVIALLNASVRRKIAFVDNALESMCSSSSKSGSLATGKLVLLDSKSSPDWTNTS
LESVLNKACEIGEGVFGTVYKAPLGGEGRLVAIKKLVTSKILQYPEDFDREVRVLAKARH
QNLISLRGYYWTPQLQLLVSDYAPEGSLQAKLHERPSSSPPLSWSTRFKIVLGTAKGLAH
LHHAFRPAIIHYNIKPSNILLDENLNPKISDFGLARLVTKLDKHMISNRFQSALGYVAPE
LACQSLRVNEKCDVYGFGMLILEIVTGRRPIEYCEDNVLILNDHVRVLLEQGNVLDCVDP
TLDTYPEEEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIKTPVPQRMEAY

Transcript Sequence

Gene sequence data has not been registered.